PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Psi012643
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family GeBP
Protein Properties Length: 478aa    MW: 53971.6 Da    PI: 6.3215
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Picea_sitchensis-6164PU_refplantGDBView CDS
gnl|UG|Psi#S55422261PU_unrefUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57332.91.8e-10147238597
     DUF573   5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk...aksgke.psfskehdqkifelskkiWg 97 
                + ws eDei+l  +++   a  g   + +++afye +k+ ++++ s+ q+ eK+rr++ +f + +++   ak  ++ +  ++ h+ + +++ k+iWg
  Psi012643 147 KKWSAEDEISLANAVLASSA--G--GQVNMTAFYERAKETLQSE-SHGQIYEKMRRMRSRFWTIESQlrdAKIAEDfFPYRSMHEAELYKVWKQIWG 238
                67*************98744..3..3468*************98.789*************9998886554433441457899*************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.4E-13147238IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    Send to blast
XGGSFLSPYF ITSNMSSSAL PSSSDDGDAR SHAKPNSTPP TKSSAASSDS EPKTPRRSSV  60
MKKSRDGSRP DTRVGPKQSR DRLEAKLPAS KKKKNSRKTG VSGNKSQIDI EELLAQTYPK  120
EPSVLGDETH ITNGLEMPSE HAKDTAKKWS AEDEISLANA VLASSAGGQV NMTAFYERAK  180
ETLQSESHGQ IYEKMRRMRS RFWTIESQLR DAKIAEDFFP YRSMHEAELY KVWKQIWGRH  240
ERRNEAAQDI EMEQNRELRS RSHARQVHNG DVNEDRHESR TEAAHMNGEP RSHSHAMQRQ  300
NGEVTDDPPE EEEEEEEHQQ AEEEDNVVET AGKTPSRVAC NHDEEFNLIQ TEIKALVCKV  360
KNNVQTMLDD TEAKMEGLID SLFKRAVVAA QVQSLGSEVG IGSCLCSSLS RRMKELECVR  420
SVREFRGLNE AEAKILQQKW RKHQIEELRT FSGRLELLQE ECKLCIKDLE TANSSHNS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5A8570.0D5A857_PICSI; Putative uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.22e-06DNA-binding storekeeper protein-related transcriptional regulator